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Question

How are alpha helices stabilized?


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Solution

  1. The 2 major factors that stabilize the alpha helix are the intrachain Hydrogen bonding and the minimization of steric interference between the side chains.
  2. An alpha helix is a kind of secondary structures adapted by proteins. Alpha helices are stabilised by hydrogen bonding. The alpha-helix (-helix), which is a right-hand-coiled or spiral conformation (helix), is a frequent motif in the secondary structure of proteins. Every backboneNHgroup donates a hydrogen bond to the backboneC=Ogroup of the amino acid.
  3. Hydrogen bonds between the "hydrogen" of the amino group in the nth amino acid and the "oxygen" of the carbonyl group in the n+4th amino acid are principally responsible for the stability of such structures. Even though a single hydrogen bond has a very low bond strength, the creation of numerous hydrogen bonds stabilises the protein structure sufficiently.
  4. Water soluble proteins, enzymes, antibodies, and other molecules frequently contain alpha helices. The membrane-spanning portion of transmembrane proteins contains alpha helices as well.

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Aminoacids and Proteins
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